Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCTGGAGCCTGTG
..((((((.((((((.(((((&))))))))))).))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286777
GeneSymbolCRISPLD1
Binding site3199,3219
Score0.904
Seed1
Au0.618
Energy-21.3
Binding len20
Me-6.246
Phylopstem-0.48306254333333337
Phylopflank-0.09207615650000003
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure