Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGCTCTGGCTGCTCCAGTCGCGGGTCC
.(((((.(((((((((((...&))))).....)))))).........))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001286782
GeneSymbolPCMTD1
Binding site104,135
Score0.846
Seed0
Au0.221
Energy-23.7
Binding len31
Me-5.337
Phylopstem0.26822968124999996
Phylopflank0.5778304025
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end5
PositionCDS
2D Structure