Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGAACCGTGGCATGTT
..((((((((((((.(.((((&))))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286782
GeneSymbolPCMTD1
Binding site3357,3377
Score0.846
Seed1
Au0.574
Energy-20.6
Binding len20
Me-5.692
Phylopstem5.5310306923076915
Phylopflank5.425171658749999
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure