Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAAAAGCTGCAGCCCAGAGCTGCAGC
((((((((((((((.(((((.&)))))..))))))))).......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286789
GeneSymbolCBR1
Binding site1160,1189
Score0.974
Seed1
Au0.426
Energy-22.2
Binding len29
Me-4.673
Phylopstem3.065280238095238
Phylopflank3.412598351250001
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure