Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTACATTGTTGCCT
....((((.((((((((((...&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001286793
GeneSymbolSPATA13
Binding site5562,5577
Score0.846
Seed0
Au0.662
Energy-16.9
Binding len15
Me-10.603
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure