Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGCGGCTGCTCCTGCC
..((((..((((((((..(((&)))..))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286802
GeneSymbolNTMT1
Binding site222,242
Score0.808
Seed0
Au0.412
Energy-21.2
Binding len20
Me-8.814
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
Position5UTR
2D Structure