Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCACCAGAATGGACAGCACAAGCCATGGAAGCCCAGATGGCTCAGTGA
((((((((....(((((((...&.))))))).))).))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330727
GeneSymbolCOPS4
Binding site1363,1411
Score0.846
Seed1
Au0.485
Energy-21.5
Binding len19
Me-12.408
Phylopstem6.339938444444445
Phylopflank4.4197489275
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure