Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCACAACCAGTGGGCTATGCAGCTGGAT
.(.(((((((((((((..(((&)))..))))))..........))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286808
GeneSymbolPRRC1
Binding site1042,1073
Score0.846
Seed0
Au0.5
Energy-22.0
Binding len31
Me-5.351
Phylopstem5.5098023478260885
Phylopflank4.4618461087500005
Longest consecutive pairings7
Position of longest consecutive pairings3
Pairings in 3prime end6
PositionCDS
2D Structure