Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCAGATGTCTGCAGCTGA
...(((((((((..((..(((&)))..))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286812
GeneSymbolLYSMD3
Binding site1367,1386
Score0.846
Seed0
Au0.647
Energy-17.6
Binding len19
Me-8.661
Phylopstem0.9991606666666666
Phylopflank0.527768055
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure