Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCCTGACATCAGCTGCAT
.((((((((..((((.(((((&)))))...))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286813
GeneSymbolTNFAIP8
Binding site6092,6115
Score0.923
Seed1
Au0.529
Energy-20.5
Binding len23
Me-8.094
Phylopstem0.007633375000000005
Phylopflank0.1079546425
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure