Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCACAGCCTGAGGCTGAAGCAGCTGCAGG
((((((((((((((...((((&.))))..))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286823
GeneSymbolEXD3
Binding site384,418
Score0.846
Seed1
Au0.338
Energy-24.8
Binding len25
Me-4.906
Phylopstem0.14009980294117647
Phylopflank0.8649079224999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure