Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCGGCACCACTGGCCAGCATCTTCCAGCTGCAGG
(((((((((..((((((((((&))))))))))...................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286823
GeneSymbolEXD3
Binding site454,493
Score0.846
Seed1
Au0.353
Energy-24.8
Binding len39
Me-8.005
Phylopstem1.0200718999999998
Phylopflank1.3178749206249996
Longest consecutive pairings10
Position of longest consecutive pairings29
Pairings in 3prime end8
PositionCDS
2D Structure