Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGCCAACCCCTTGCAGAGTGGCAGCTTTGCAAG
((((((((((..((((((((.&.))))))))....))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286832
GeneSymbolRCBTB2
Binding site522,558
Score0.846
Seed1
Au0.441
Energy-23.8
Binding len26
Me-10.109
Phylopstem0.50220275
Phylopflank0.792838805
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure