Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAACAACAGTTA
....(((((..(((((((((.&)))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286832
GeneSymbolRCBTB2
Binding site346,363
Score0.923
Seed0
Au0.515
Energy-19.8
Binding len17
Me-13.614
Phylopstem0.23533631111111117
Phylopflank0.53651397125
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end7
Position5UTR
2D Structure