Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTTCTGTAACATTTCTCTATTTTTTGAAATACAATTGCAATAACTTCAGTCTTTTTACATTCTTCTGCTGCAT
.((((((((((((((((((((&)))).............................))))))))))...........................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286838
GeneSymbolGRID2
Binding site3348,3425
Score0.846
Seed1
Au0.603
Energy-18.5
Binding len77
Me-3.793
Phylopstem1.8622664276315788
Phylopflank2.3806098375000007
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end8
Position3UTR
2D Structure