Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAACAAGTCCCCTGATGAAGCCACCGCGGCTGA
...((((((((((.((.....&.)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286839
GeneSymbolFARP1
Binding site2924,2962
Score0.923
Seed0
Au0.382
Energy-21.4
Binding len15
Me-7.371
Phylopstem4.3536242000000005
Phylopflank2.8475304025
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure