Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAACATTTTCGCAGCA
.....(((((((.(((.((((&))))..)))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286946
GeneSymbolTXNDC8
Binding site391,411
Score0.846
Seed0
Au0.662
Energy-16.6
Binding len20
Me-14.955
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure