Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCTTAAGCAGCTAGGTAAA
((((((((((....(((((((&)))))))....))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286947
GeneSymbolTXNDC8
Binding site367,391
Score0.846
Seed1
Au0.632
Energy-18.5
Binding len24
Me-12.255
Phylopstem-0.13412169166666665
Phylopflank-0.18862537499999998
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure