Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGCAGCTGCAGGAGTGAG
((((..(((((((((((....&)))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286952
GeneSymbolTRMT10B
Binding site1088,1106
Score0.923
Seed0
Au0.588
Energy-20.1
Binding len18
Me-9.958
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure