Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCAGCCTGGCTGCAGC
(((((((((.(((((..(((.&)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001286993
GeneSymbolFGD3
Binding site413,433
Score1.0
Seed1
Au0.324
Energy-24.1
Binding len20
Me-5.413
Phylopstem0.3880613333333333
Phylopflank-0.09230461499999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure