Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCTCTCCCGGCCGCATGCGGCAAT
((((.((((((((((..(((.&.)))..)))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287001
GeneSymbolST6GALNAC6
Binding site784,812
Score0.846
Seed0
Au0.368
Energy-21.7
Binding len23
Me-8.29
Phylopstem-0.6828472363636365
Phylopflank-0.37539572875
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure