Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAATGCCAGGC
.((((((((....((((((...&)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001364800
GeneSymbolRBFOX1
Binding site1845,1860
Score0.846
Seed1
Au0.397
Energy-20.0
Binding len15
Me-12.497
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure