Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCTCAGCCAGCTGCC
..((((((..(((((...(((&)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287003
GeneSymbolST6GALNAC6
Binding site1581,1599
Score0.846
Seed1
Au0.485
Energy-18.9
Binding len18
Me-7.489
Phylopstem2.4358503333333337
Phylopflank3.6216752199999993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure