Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGGGGCCGAGCTGACAT
.(((((((.(((((.(((((.&)))))...)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287006
GeneSymbolSUSD3
Binding site819,841
Score0.923
Seed1
Au0.368
Energy-19.1
Binding len22
Me-5.585
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure