Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAACAAACAGATCAGTATCCCCTTGTCTGCCCTGCAGCTGCC
..(((((((((((.((((((.&.))))).).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287036
GeneSymbolKIAA1958
Binding site1264,1308
Score0.923
Seed1
Au0.456
Energy-24.2
Binding len23
Me-5.814
Phylopstem4.336593769230769
Phylopflank1.8443803977499997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure