Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCCCCGAGGCTGCAGC
((((((((.(((..(.(((((&))))))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287045
GeneSymbolSH3GLB2
Binding site2869,2890
Score0.974
Seed1
Au0.309
Energy-21.6
Binding len21
Me-7.373
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure