Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCACCCGCAGCTCCAC
.((.((((((((.((.(((((&))))))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287054
GeneSymbolZKSCAN1
Binding site1820,1840
Score0.923
Seed0
Au0.426
Energy-23.6
Binding len20
Me-8.348
Phylopstem-0.764927375
Phylopflank2.2454380025000003
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure