Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCACAGTTCCAAT
(((.(((((.(((((.(((((&)))))))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287054
GeneSymbolZKSCAN1
Binding site1568,1589
Score0.923
Seed0
Au0.456
Energy-20.9
Binding len21
Me-8.445
Phylopstem1.5550304000000001
Phylopflank1.9667828825
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure