Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCCTTGCCAGGA
.(((((((......((((....&))))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287055
GeneSymbolZKSCAN1
Binding site4340,4355
Score0.846
Seed1
Au0.588
Energy-15.7
Binding len15
Me-14.41
Phylopstem0.8458484285714285
Phylopflank0.32080756875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure