Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCACCCGCAGCTCCAC
.((.((((((((.((.(((((&))))))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287055
GeneSymbolZKSCAN1
Binding site1123,1143
Score1.0
Seed0
Au0.426
Energy-23.6
Binding len20
Me-8.348
Phylopstem3.1404121249999997
Phylopflank1.3086219399999997
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure