Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCTGGAGCAGGGAGAGGGCAGGCTGCAGCTGCGGG
((((((((((((((((.....&.)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287059
GeneSymbolHECW1
Binding site1861,1898
Score1.0
Seed1
Au0.338
Energy-24.7
Binding len19
Me-3.938
Phylopstem0.9621193647058824
Phylopflank1.387776005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure