Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATGTCTGGCCAGA
..(((((.....((((((....&)))))).....))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287061
GeneSymbolRABGEF1
Binding site1361,1378
Score1.0
Seed0
Au0.5
Energy-16.8
Binding len17
Me-15.741
Phylopstem4.456016000000001
Phylopflank3.7086940537500004
Longest consecutive pairings6
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure