Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGAGTTTGGCTCCTGCACTCTCATTTCAGCCATAGCTGCAGA
(((((((((.(((((..(((.&.)))............))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287062
GeneSymbolRABGEF1
Binding site160,207
Score0.923
Seed1
Au0.456
Energy-22.1
Binding len32
Me-5.413
Phylopstem0.14553711111111112
Phylopflank0.05017410499999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure