Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCTTTTGCCTGCCAGGA
.(((((((..(((.(((.....&)))..)))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287140
GeneSymbolTPD52
Binding site4315,4333
Score0.923
Seed1
Au0.559
Energy-16.2
Binding len18
Me-6.949
Phylopstem1.201435357142857
Phylopflank0.2483701087499999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure