Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCCTCAGCTGCT
..(((((((.((((.......&)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287140
GeneSymbolTPD52
Binding site823,836
Score1.0
Seed1
Au0.485
Energy-18.8
Binding len13
Me-7.168
Phylopstem1.6520586142857143
Phylopflank0.6236851487500004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure