Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACAAAACTGTTGCTGCAC
.((((((.((((((((.((((&)))).)))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364826
GeneSymbolPPHLN1
Binding site1280,1303
Score0.923
Seed1
Au0.574
Energy-22.3
Binding len23
Me-6.107
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure