Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACTTTGAACATGCCAGA
..(((((((.(((.((((....&)))).)))...))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287220
GeneSymbolRPS6KC1
Binding site3017,3036
Score0.923
Seed1
Au0.559
Energy-17.4
Binding len19
Me-7.056
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure