Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CGGCGGGAAGTGAGCCAGGGCTTGGCGCGGCGGCCGTGGTTGCGGC
((((((((((((((((...((&.))...)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287246
GeneSymbolBLM
Binding site1,47
Score0.846
Seed1
Au0.309
Energy-24.8
Binding len23
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure