Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTCCCAGAAGGTTGGCCAGA
..((((((.(((((((((((((&)))).)))))))))..)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330728
GeneSymbolSIRPA
Binding site3374,3397
Score1.0
Seed1
Au0.397
Energy-27.5
Binding len23
Me-6.013
Phylopstem0.6530346142857143
Phylopflank0.010076988749999986
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure