Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GACCAGGCAGCTGCAGC
((((((((((((((.......&))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287252
GeneSymbolCCNI2
Binding site975,992
Score0.846
Seed1
Au0.338
Energy-21.4
Binding len17
Me-4.906
Phylopstem6.4907283125
Phylopflank5.486247575
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure