Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACCCCTGGGCTGCAGA
((((((((..((..((((((.&)))))).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287339
GeneSymbolCAB39L
Binding site90,110
Score0.923
Seed1
Au0.426
Energy-22.6
Binding len20
Me-8.382
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure