Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGCAGCTGTGGCCTCCCTGGCCAGTGCCCTTGCAGG
(((((((((((((((((((((&)))))).))))))))))..................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287339
GeneSymbolCAB39L
Binding site2770,2811
Score0.846
Seed1
Au0.309
Energy-20.1
Binding len41
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end8
Position3UTR
2D Structure