Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTCATTCAATATTAACAGGGTTGCAACTCAGGCTGTAGA
((((((((..((((((((...&.))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287340
GeneSymbolNADK2
Binding site684,728
Score0.846
Seed1
Au0.647
Energy-20.0
Binding len20
Me-6.236
Phylopstem0.065504
Phylopflank-0.12261411749999995
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure