Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTCATTCAATATTAACAGGGTTGCAACTCAGGCTGTAGA
((((((((..((((((((...&.))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287341
GeneSymbolNADK2
Binding site901,945
Score0.923
Seed1
Au0.647
Energy-20.0
Binding len20
Me-6.236
Phylopstem0.41512625000000003
Phylopflank-0.07203532532499989
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure