Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGGGACCAA
...(((.((((((((((((...&))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001364841
GeneSymbolNKX6-3
Binding site2314,2330
Score1.0
Seed0
Au0.471
Energy-25.4
Binding len16
Me-8.058
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure