Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTATCTTGTTCCAAGGCCAGGG
.((((((..((((.(((((...&))))).))))......)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001287347
GeneSymbolTAL1
Binding site3849,3872
Score0.846
Seed1
Au0.618
Energy-18.3
Binding len23
Me-8.02
Phylopstem4.458453333333333
Phylopflank4.928122665
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure