Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGCAGGCCCGTGGCTGCGC
.(((((((((((((((.(((.&)))..))))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364841
GeneSymbolNKX6-3
Binding site498,521
Score0.923
Seed1
Au0.324
Energy-23.8
Binding len23
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure