Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCTGCTGGCTGCAGA
(((((((((((((((......&))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001364841
GeneSymbolNKX6-3
Binding site1609,1626
Score0.981
Seed1
Au0.397
Energy-22.3
Binding len17
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure