Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGTACGTGAAGACGCAGCTGCAGCTGGAC
.(.(((((((((((((.....&.))))))))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287387
GeneSymbolSLC25A1
Binding site160,193
Score0.846
Seed0
Au0.294
Energy-24.2
Binding len17
Me-5.351
Phylopstem0.4961741076923077
Phylopflank0.8311258850000002
Longest consecutive pairings13
Position of longest consecutive pairings3
Pairings in 3prime end3
Position5UTR
2D Structure