Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGGCCAAACAGCTGCAGG
(((((((((.((((((..(((&)))))))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001287390
GeneSymbolKYAT1
Binding site448,470
Score0.846
Seed1
Au0.382
Energy-21.2
Binding len22
Me-5.18
Phylopstem0.142729
Phylopflank0.4618816212499999
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end6
PositionCDS
2D Structure